Site Level
[Categories]
Endemic ⇒ where Prevalence >= 1
Non-endemic ⇒ where Prevalence < 1
TAS
Method_0 == 'TAS'
Sentinel Sites
Method_0 == 'SS/Spot'
Mapping Surveys
Method_0 == 'Mapping survey'
Surveillance
Method_0 == 'Surveillance'
Note: Jorge says that Surveillance is already included in Sentinel Sites. So, this one does not need to be included.
IU
Endemicity (Endem_MDA column determines category)
Non endemic Endemic (MDA not started) Endemic (under MDA) Endemic, Post-MDA Surveillance Mapping gap
MDA/PC rounds (Projections)
5 to 1 ⇒ Endemicity == 'Requiring PC', see MDA_Left value Under surveillance ⇒ Endemicity == 'Under surveillance', MDA_Left == 99 Mapping gap in 2017 ⇒ Endemicity == 'Unknown', MDA_Left == 999 Non endemic ⇒ Endemicity == 'Non-endemic', MDA_left == 999
MDA/PC rounds (Therapeutic)
Mapping gap ⇒ Mapping_gap == 1
Under surveillance ⇒ Endemicity == 'Under surveillance' (or EffMDA_n == 99)
Non endemic ⇒ Endemicity == 'Non-endemic' (or EffMDA_n == 999)
Not MDA yet or <65% ⇒ EffMDA_n == 0
≥ 5 effective MDA rounds ⇒ EffMDA_n ≥ 5
< 5 effective MDA rounds ⇒ EffMDA_n < 5 and EffMDA_n > 0
MDA/PC rounds (Geographic)
Mapping gap ⇒ Mapping_gap == 1
Under surveillance ⇒ Endemicity == 'Under surveillance' (or MDA_n == 99)
Non endemic ⇒ Endemicity == 'Non-endemic' (or MDA_n == 999)
Not MDA yet ⇒ MDA_n == 0
≥ 5 MDA rounds ⇒ MDA_n ≥ 5
< 5 MDA rounds ⇒ MDA_n < 5 and MDA_n > 0
Site Level
[Categories]
Hyper-endemic (≥40%) ⇒ Prevalence ≤ 0.4 Meso-endemic (20%-39.9%) ⇒ Prevalence ≥ 0.2 and Prevalence < 0.4 Hypo-endemic (0-19.9%) ⇒ Prevalence ≥ 0 and Prevalence < 0.2
Impact Assessment (Skin Biopsy)
⇒ where Assessment_Type != 'Mapping' and Diagnostic == 'Parasitology (Skin biopsy)'
Mapping Surveys (Anti-OV16 Test)
⇒ where Assessment_Type = 'Mapping' and Diagnostic == 'Immunology (Ov16)'
Mapping Surveys (Nodule Palpation)
⇒ where Assessment_Type = 'Mapping' and Diagnostic == 'Nodule palpation'
Mapping Surveys (Skin Biopsy)
⇒ where Assessment_Type = 'Mapping' and Diagnostic == 'Parasitology (Skin biopsy)'
IU
Endemicity (Endemicity column determines category)
Non endemic Endemic (MDA not started) Endemic (under MDA) Unknown (under LF MDA) Endemic, Post-MDA Surveillance Consider Oncho Elimination Mapping
MDA/PC coverage (Geographic)
Under surveillance ⇒ MDA == 99
Non endemic ⇒ MDA == 999
Consider Oncho Elimination Mapping ⇒ Endemicity == 'Consider Oncho Elimination Mapping'
MDA delivered ⇒ MDA > 0 && Cov ≥ 0
MDA not delivered ⇒ MDA == 0
Endemicity unknown (Under LF MDA) ⇒ Endemicity == 'Unknown (under LF MDA)'
MDA/PC coverage (Therapeutic)
Under surveillance ⇒ EffMDA == 99
Non endemic ⇒ EffMDA == 999
Consider Oncho Elimination Mapping ⇒ Endemicity == 'Consider Oncho Elimination Mapping'
MDA delivered ⇒ EffMDA > 0 && Cov ≥ 65
MDA not delivered ⇒ Cov < 65
Endemicity unknown (Under LF MDA) ⇒ Endemicity == 'Unknown (under LF MDA)'
Under surveillance ⇒ mda_column == 99
Non endemic ⇒ mda_column == 999
Consider Oncho Elimination Mapping ⇒ Endemicity == 'Consider Oncho Elimination Mapping'
MDA delivered ⇒ MDA > 0 && Cov ≥ 0
MDA not delivered ⇒ MDA == 0
Endemicity unknown (Under LF MDA) ⇒ Endemicity == 'Unknown (under LF MDA)'
MDA/PC rounds (Geographic)
MDA not delivered 1-2 MDA rounds/4-yrs 3-4 MDA rounds/4-yrs Under surveillance Consider Oncho Elimination Mapping Non endemic Endemicity unknown (Under LF MDA)
MDA/PC rounds (Therapeutic)
Not MDA or <65% 1-2 MDA rounds/4-yrs 3-4 MDA rounds/4-yrs Under surveillance Consider Oncho Elimination Mapping Non endemic Endemicity unknown (Under LF MDA)
IU
Endemicity (Endemicity column determines category)
Predicted RAPLOA = 0 ⇒ RAPLOA 0 Predicted RAPLOA > 0 ⇒ Hypo-endemic | Meso-endemic | Hyper-endemic No data ⇒ No data Non-endemic ⇒ Non-endemic
Site Level
[Categories]
0% ⇒ Prevalence == 0
0%-19.9% ⇒ Prevalence > 0.0 and Prevalence < 20.0 20%-39.9% ⇒ Prevalence ≥ 20.0 and Prevalence < 40.0 ≥40% ⇒ Prevalence ≥ 40.0
Mapping Surveys
Blood smear
⇒ where Diagnostic == 'Parasitology (Thick Blood S)'
EWH-Questionnaire
⇒ where Diagnostic == 'Questionnaire'
Site Level
[Categories]
<1% (Non-endemic) 1%-10% (Low endemicity) 10%-50% (Moderate endemicity)
=50% (High endemicity) PCT required PCT not required
Mapping Surveys (All species)
⇒ all
Mapping Surveys (S. haematobium)
⇒ where Smax_Species == 'S. haematobium'
Mapping Surveys (S. mansoni)
⇒ where Smax_Species == 'S. mansoni'