Importance: Medium — QA: Open (4 items pending Sam). No red/critical items. Tasks: monitoring DONE; 4 follow-ups PENDING.

What was done

• Ran the daily repo-health scan across all 12 SAIL repos. The local runner could not rebuild within the 45s sandbox ceiling (background processes do not survive across isolated bash calls), so I fell back to the hosted Cloudflare Worker for authoritative remote state and supplemented with direct local git reads and direct GitHub API calls for the things the hosted summary skips (dependabot.yml + Actions secrets).
• Verified the two highest-leverage security checks live: NOTION_TOKEN is present on Notion-wiki (the cause of the late-April 8-day streak is absent), and every GitHub Actions secret is mirrored in the vault (no secrets_github_only drift).
• Confirmed Dependabot coverage at 11/11 git repos. A first pass using guessed repo slugs falsely flagged ha-law and sail-spanish-lp as missing; re-checking against the real GitHub slugs (ha-law-redesign, spanish-lp) confirmed both present. Caught and corrected before it hit the report.
• Cleared one stale zero-byte index.lock on sail-hr via the Mac shell (the sandbox returned Operation not permitted on unlink).
• Wrote the full report and mirrored the QA section to the Codex QA queue.

Problems found

• 15 failing Dependabot update jobs (pip + npm_and_yarn + github_actions) created 06-04 ~00:26 UTC across sail-litify, sail-marketing, sail-knowledge, sail-infrastructure, sail-templates. The 'Run Dependabot' step fails because the config targets root /. for ecosystems with no resolvable manifest there. These recur daily, produce no PRs, and effectively disable dependency-drift detection on those 5 repos. Not a code regression — a config fix.
• sail-knowledge (Notion-wiki) is on branch hotfix/redact-leaked-pat-2026-05-08 with no upstream set.
• Runner/sandbox limits: checkpoint is 98.6h stale and the runner can't rebuild inside 45s. No autonomous git pulls/PRs were attempted this run because fetch is disabled and local origin refs are stale — acting on stale refs falls below the 85% safe-rollback bar. Surfaced as QA instead.

Why the session ended

Completed the scan and all outputs. No blocker. Held git-write actions back deliberately given stale-ref + fetch-disabled constraints.

Recommended next actions (all pending Sam)

1. Record the spec→GitHub-slug map (ha-law→ha-law-redesign, sail-spanish-lp→spanish-lp) in the task spec, and have the runner check remote default branch instead of the working tree.
2. Set upstream / push sail-knowledge's hotfix branch (or merge-and-delete if it already landed).
3. Repair the 5 repos' dependabot.yml so ecosystems point at real manifest directories.
4. Add a resumable/segmented checkpoint to the runner so it survives the 45s ceiling, or make hosted-first the default lane for scheduled runs.

Handoff for next agent

Everything needed is in /Users/samaguiar/Documents/Codex/repo-health/2026-06-04.md and the run-state/2026-06-04/ folder (hosted JSON saved). The 4 items above are clean, low-risk, and well-scoped; pick up any of them directly. The Dependabot config fix is the most impactful for restoring drift detection. None are urgent. The local runner is the right actor for git writes once it can fetch — this constrained sandbox run intentionally avoided them.